miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|112357891|gb|AM388128.1|AM388128 GCGTCCGAAAAAAATNNNGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATCTTACTTGAGAGATGAAGATC
TGACACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGAGCCAAATGTATCAGTTTCAA
GGACGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGGCCAAAGATTCCGACATTAT
CCTCGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATTAACCGACACAAGTTTCCAG
TTTCTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGAAGGAGTTTACTACGAGTCT
CCAAATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTCTTTCCCTGCCCGAGTCCGT
TAAGAGCTCCTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTCCTTATGGCATTTTGGAAAGA
AACTTGCTTCTCAAGAAACTGCTGATTATCCTATTGAAAAAGCGGTTGAAGCGTTTTGTCAAGGGAAGTTTATAGGTGGA
CCCTTTTGGGATCATGTGCTGGAGTACTGGTATGCNNNCCTTGA




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  385 bits (989), Expect = e-106
 Identities = 181/206 (87%), Positives = 195/206 (94%), Gaps = 1/206 (0%)
 Frame = +2

Query: 62  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 241
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 242 LVTNPKSGTTWLKALVFSLINRHKFPVSS-GDHPLLVTNPHLLIPFLEGVYYESPNFDFT 418
           LVTNPKSGTTWLKALVF+L+NRHKFPVSS G+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 419 ELPSPRLMNTHISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLASQETADYPIE 598
            LPSPRLMNTHIS LSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA +ETADYPIE
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIE 189

Query: 599 KAVEAFCQGKFIGGPFWDHVLEYWYA 676
           KAVEAFC+GKFIGGPFWDH+LEYWYA
Sbjct: 190 KAVEAFCEGKFIGGPFWDHILEYWYA 215